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    translocator assembly/maintenance protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823917, updated on 18-Sep-2024

    Summary

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    Official Full Name
    translocator assembly/maintenance protein
    Primary source
    TAIR:AT3G47630
    Locus tag
    AT3G47630
    See related
    Araport:AT3G47630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (17562941..17565685, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene transcription regulator/ zinc ion binding protein Neighboring gene TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene DnaJ/Hsp40 cysteine-rich domain superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cytidine diphosphate diacylglycerol synthase is essential for mitochondrial structure and energy production in Arabidopsis thaliana. Zhang Q, et al. Plant J, 2023 Apr. PMID 36789486
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001035750.2
    NM_001339321.1
    NM_001339322.1
    NM_001339323.1
    NM_114631.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidate cytidylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phosphatidate cytidylyltransferase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in CDP-diacylglycerol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in CDP-diacylglycerol biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in cardiolipin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    translocator assembly/maintenance protein
    NP_001030827.1
    • CONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_190347.2
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325 Blast hits to 325 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      17562941..17565685 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339320.1 → NP_001327094.1  translocator assembly/maintenance protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9I7, A0A5S9XIP9, A0A654FIA1, Q9SN75
      Conserved Domains (1) summary
      pfam09139
      Location:9 → 326
      Mmp37; Mitochondrial matrix Mmp37

    2. NM_114631.4 → NP_190347.2  translocator assembly/maintenance protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190347.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9I7, A0A5S9XIP9, F4JBM0
      Conserved Domains (1) summary
      pfam09139
      Location:24 → 314
      Mmp37; Mitochondrial matrix Mmp37

    3. NM_001339321.1 → NP_001327095.1  translocator assembly/maintenance protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LR92

    4. NM_001339322.1 → NP_001327096.1  translocator assembly/maintenance protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9I7, A0A1I9LR93, A0A5S9XIP9

    5. NM_001339323.1 → NP_001327093.1  translocator assembly/maintenance protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9I7, A0A5S9XIP9, A0A654FIA1, Q9SN75
      Conserved Domains (1) summary
      pfam09139
      Location:9 → 326
      Mmp37; Mitochondrial matrix Mmp37

    6. NM_001035750.2 → NP_001030827.1  translocator assembly/maintenance protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030827.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9I7, A0A5S9XIP9, A0A654FIA1, Q9SN75
      Conserved Domains (1) summary
      pfam09139
      Location:9 → 326
      Mmp37; Mitochondrial matrix Mmp37
    Nucleotide Protein
    Heading Accession and Version

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