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    YDG/SRA domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834762, updated on 18-Sep-2024

    Summary

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    Official Full Name
    YDG/SRA domain-containing protein
    Primary source
    TAIR:AT5G47160
    Locus tag
    AT5G47160
    See related
    Araport:AT5G47160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQL5.1; MQL5_1
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (19155976..19158249)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene GATA transcription factor 27 Neighboring gene YDG/SRA domain-containing protein Neighboring gene uncharacterized protein Neighboring gene low-molecular-weight cysteine-rich 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    YDG/SRA domain-containing protein
    NP_001318752.1
    • YDG/SRA domain-containing protein; CONTAINS InterPro DOMAIN/s: SRA-YDG (InterPro:IPR003105); BEST Arabidopsis thaliana protein match is: YDG/SRA domain-containing protein (TAIR:AT5G47150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19155976..19158249
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344711.1 → NP_001318752.1  YDG/SRA domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MFM8, Q9LVU3
      UniProtKB/TrEMBL
      A0A178UMA6, A0A5S9YBS3
      Conserved Domains (1) summary
      pfam02182
      Location:260 → 407
      SAD_SRA; SAD/SRA domain

    2. NM_001344712.1 → NP_001330473.1  YDG/SRA domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MFM8, Q9LVU3
      UniProtKB/TrEMBL
      A0A178UMA6, A0A5S9YBS3
      Conserved Domains (1) summary
      pfam02182
      Location:260 → 407
      SAD_SRA; SAD/SRA domain

    3. NM_124087.2 → NP_199527.1  YDG/SRA domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199527.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MFM8, Q9LVU3
      UniProtKB/TrEMBL
      A0A178UMA6, A0A5S9YBS3
      Conserved Domains (1) summary
      pfam02182
      Location:260 → 407
      SAD_SRA; SAD/SRA domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LVU3.1

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