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    Gibberellin-regulated family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836106, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Gibberellin-regulated family protein
    Primary source
    TAIR:AT5G59845
    Locus tag
    AT5G59845
    See related
    Araport:AT5G59845
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (24111304..24112100)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DNA-binding protein Neighboring gene Ras-related small GTP-binding family protein Neighboring gene ncRNA Neighboring gene Ribosomal protein S8 family protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene glycine-rich RNA-binding-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis GASA10 gene encodes a cell wall protein strongly expressed in developing anthers and seeds. Trapalis M, et al. Plant Sci, 2017 Jul. PMID 28554477
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_125377.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Gibberellin-regulated family protein
    NP_568914.1
    • Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G39540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24111304..24112100
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125377.4 → NP_568914.1  Gibberellin-regulated family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568914.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LFM2, Q9FJF0
      UniProtKB/TrEMBL
      A0A178ULB2, A0A5S9YHX5
      Conserved Domains (1) summary
      pfam02704
      Location:30 → 89
      GASA; Gibberellin regulated protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LFM2.1

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