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    Copper amine oxidase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840054, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Copper amine oxidase family protein
    Primary source
    TAIR:AT1G31670
    Locus tag
    AT1G31670
    See related
    Araport:AT1G31670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F27M3.13; F27M3_13
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (11337536..11341889)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RHO guanyl-nucleotide exchange factor 14 Neighboring gene bystin-like protein Neighboring gene Copper amine oxidase family protein Neighboring gene Copper amine oxidase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The CEP family in land plants: evolutionary analyses, expression studies, and role in Arabidopsis shoot development. Roberts I, et al. J Exp Bot, 2013 Dec. PMID 24179095
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables hormone activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in nitrate import ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in regulation of root development ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in response to jasmonic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apoplast ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Copper amine oxidase family protein
    NP_174448.1
    • Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31690.1); Has 1560 Blast hits to 1555 proteins in 278 species: Archae - 14; Bacteria - 380; Metazoa - 250; Fungi - 453; Plants - 252; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      11337536..11341889
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102902.2 → NP_174448.1  Copper amine oxidase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174448.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P0DO00, Q9C6V7
      Conserved Domains (4) summary
      PLN02566
      Location:89 → 724
      PLN02566; amine oxidase (copper-containing)
      pfam01179
      Location:324 → 727
      Cu_amine_oxid; Copper amine oxidase, enzyme domain
      pfam02727
      Location:107 → 196
      Cu_amine_oxidN2; Copper amine oxidase, N2 domain
      pfam02728
      Location:203 → 300
      Cu_amine_oxidN3; Copper amine oxidase, N3 domain
    Nucleotide Protein
    Heading Accession and Version

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