SMAD/FHA domain-containing protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: SMAD/FHA domain-containing protein
Primary source: TAIR:AT2G45460
Locus tag: AT2G45460
See related: Araport:AT2G45460
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F4L23.3
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 2

Exon count:: 13

Sequence:: Chromosome: 2; NC_003071.7 (18736803..18741916, complement)

Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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NM_001202821.1

Supported by ESTs:

NM_180106.1

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in cytoplasm	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: SMAD/FHA domain-containing protein

NP_001189750.1

SMAD/FHA domain-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253).

NP_001189751.1

SMAD/FHA domain-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253).

NP_850437.1

SMAD/FHA domain-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); Has 90361 Blast hits to 52813 proteins in 2902 species: Archae - 1014; Bacteria - 17012; Metazoa - 41214; Fungi - 7482; Plants - 4542; Viruses - 303; Other Eukaryotes - 18794 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003071.7 Reference assembly

Range

18736803..18741916 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001202822.2 → NP_001189751.1 SMAD/FHA domain-containing protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001189751.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A7G2EGF6, F4IG61

Conserved Domains (2) summary

cd00060
Location:87 → 171

FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...

pfam15619
Location:363 → 548

Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
NM_001337132.1 → NP_001325090.1 SMAD/FHA domain-containing protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178VPL7, A0A1P8B236, A0A384LH27, A0A5S9X7Q3

Conserved Domains (3) summary

COG1196
Location:240 → 528

Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

cd00060
Location:87 → 171

FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...

NF033845
Location:745 → 898

MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
NM_001202821.1 → NP_001189750.1 SMAD/FHA domain-containing protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001189750.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A7G2EGF6, F4IG63

Conserved Domains (2) summary

cd00060
Location:87 → 171

FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...

pfam15619
Location:377 → 562

Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
NM_180106.1 → NP_850437.1 SMAD/FHA domain-containing protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_850437.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9X7Q3, F4IG62

Conserved Domains (1) summary

cd00060
Location:87 → 171

FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...