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    side-VIII sidestep VIII [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37310, updated on 9-Dec-2024

    Summary

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    Official Symbol
    side-VIIIprovided by FlyBase
    Official Full Name
    sidestep VIIIprovided by FlyBase
    Primary source
    FLYBASE:FBgn0086604
    Locus tag
    Dmel_CG12484
    See related
    AllianceGenome:FB:FBgn0086604
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    12484; CG12484; CG30143; CG33041; CT32777; Dmel\CG12484
    Old locus tag
    CG30143; CG33041; Dmel_CG30143; Dmel_CG33041
    Summary
    Is expressed in adult head; lineage NB3-1 primary motor neurons; and pCC neuron. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See side-VIII in Genome Data Viewer
    Location:
    57A2-57A3; 2-91 cM
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (20424338..20478951)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (16311843..16366456)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44643 Neighboring gene Odorant-binding protein 57c

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Auditory responses of engrailed and invected-expressing Johnston's Organ neurons in Drosophila melanogaster. Pézier A, et al. PLoS One, 2013. PMID 23940751, Free PMC Article
    2. Combining genome-wide methods to investigate the genetic complexity of courtship song variation in Drosophila melanogaster. Turner TL, et al. Mol Biol Evol, 2013 Sep. PMID 23777628, Free PMC Article
    3. Searching for guidance cues: follow the Sidestep trail. Aberle H. Fly (Austin), 2009 Oct-Dec. PMID 19786838
    4. Using Drosophila to identify naturally occurring genetic modifiers of amyloid beta 42- and tau-induced toxicity. Yang M, et al. G3 (Bethesda), 2023 Aug 30. PMID 37311212, Free PMC Article
    5. Identification of Novel Regulators of the JAK/STAT Signaling Pathway that Control Border Cell Migration in the Drosophila Ovary. Saadin A, et al. G3 (Bethesda), 2016 Jul 7. PMID 27175018, Free PMC Article

    See all (40) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    sidestep VIII
    Names
    CG12484-PA
    CG12484-PB
    CG12484-PD
    CG12484-PE
    side-VIII-PA
    side-VIII-PB
    side-VIII-PD
    side-VIII-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      20424338..20478951
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001103912.3 → NP_001097382.2  sidestep VIII, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097382.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYJ6
      Conserved Domains (4) summary
      smart00408
      Location:394 → 459
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:389 → 464
      IG_like; Immunoglobulin like
      pfam13927
      Location:490 → 554
      Ig_3; Immunoglobulin domain
      cl11960
      Location:296 → 373
      Ig; Immunoglobulin domain

    2. NM_001144248.2 → NP_001137720.1  sidestep VIII, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137720.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7YZM1
      Conserved Domains (4) summary
      smart00408
      Location:387 → 452
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:382 → 457
      IG_like; Immunoglobulin like
      pfam13927
      Location:483 → 547
      Ig_3; Immunoglobulin domain
      cl11960
      Location:289 → 366
      Ig; Immunoglobulin domain

    3. NM_001103913.3 → NP_001097383.3  sidestep VIII, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097383.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYJ7
      Conserved Domains (4) summary
      smart00408
      Location:387 → 452
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:382 → 457
      IG_like; Immunoglobulin like
      pfam13927
      Location:483 → 547
      Ig_3; Immunoglobulin domain
      cl11960
      Location:289 → 366
      Ig; Immunoglobulin domain

    4. NM_166392.4 → NP_725963.3  sidestep VIII, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725963.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZBU2, Q8MYS2
      Conserved Domains (3) summary
      smart00410
      Location:60 → 166
      IG_like; Immunoglobulin like
      pfam13927
      Location:377 → 456
      Ig_3; Immunoglobulin domain
      cl11960
      Location:296 → 373
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A8DYJ6 A8DYJ6
    A8DYJ7 A8DYJ7
    B7YZM1 B7YZM1
    Q8MYS2 Q8MYS2

    Gene LinkOut

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