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    Drgx Dorsal root ganglia homeobox [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 5740176, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Drgxprovided by FlyBase
    Official Full Name
    Dorsal root ganglia homeoboxprovided by FlyBase
    Primary source
    FLYBASE:FBgn0085369
    Locus tag
    Dmel_CG34340
    See related
    AllianceGenome:FB:FBgn0085369
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG10017; CG2808; CG34340; Dmel\CG34340
    Old locus tag
    CG10017; CG2808; Dmel_CG10017; Dmel_CG2808
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in central brain primordium; embryonic brain; larval ventral nerve cord; organism; and ventral nerve cord primordium. Orthologous to human DRGX (dorsal root ganglia homeobox). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Drgx in Genome Data Viewer
    Location:
    24A5-24B1; 2-10 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (3662745..3692114)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (3662745..3692114)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase family 36 member A1 Neighboring gene uncharacterized protein Neighboring gene foraging Neighboring gene mir-4972 stem loop Neighboring gene Seminal fluid protein 24Ba Neighboring gene Seminal fluid protein 24Bd Neighboring gene Seminal fluid protein 24Bb Neighboring gene Seminal fluid protein 24Bc Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    dorsal root ganglia homeobox
    Names
    CG34340-PE
    CG34340-PF
    Drgx-PE
    Drgx-PF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      3662745..3692114
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298663.1 → NP_001285592.1  dorsal root ganglia homeobox, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285592.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0AVV3, A8DYQ2
      Conserved Domains (2) summary
      pfam00046
      Location:56 → 108
      Homeobox; Homeobox domain
      pfam03826
      Location:428 → 445
      OAR; OAR domain

    2. NM_001103605.2 → NP_001097075.2  dorsal root ganglia homeobox, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097075.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0AVV3, A8DYQ2
      Conserved Domains (2) summary
      pfam00046
      Location:56 → 108
      Homeobox; Homeobox domain
      pfam03826
      Location:428 → 445
      OAR; OAR domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0AVV3 A0AVV3

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