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    Taf13 TBP-associated factor 13 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35297, updated on 9-Dec-2024

    Summary

    Official Symbol
    Taf13provided by FlyBase
    Official Full Name
    TBP-associated factor 13provided by FlyBase
    Primary source
    FLYBASE:FBgn0032847
    Locus tag
    Dmel_CG10756
    See related
    AllianceGenome:FB:FBgn0032847
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    38B.15; CG10756; Dmel\CG10756; dTAF[[II]]18; TAF; taf13; TAF13; Taf18; TAF18; TAF[[II]]; TAF[[II]]18; TFIID
    Summary
    Predicted to enable protein heterodimerization activity. Predicted to contribute to RNA polymerase II general transcription initiation factor activity. Predicted to be involved in transcription initiation at RNA polymerase II promoter. Predicted to be part of transcription factor TFIID complex. Is expressed in several structures, including antennal anlage; antennal primordium; anterior endoderm; head epidermis primordium; and mesoderm. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 60. Orthologous to human TAF13 (TATA-box binding protein associated factor 13). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Taf13 in Genome Data Viewer
    Location:
    38B6-38B6; 2-54 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (20093088..20093849, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (20093088..20093849, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene nebbish Neighboring gene fledgling of Klp38B Neighboring gene uncharacterized protein Neighboring gene Pyridine nucleotide-disulfide oxidoreductase domain 1 Neighboring gene nessun dorma Neighboring gene mitochondrial ribosomal protein S18B

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    contributes_to RNA polymerase II general transcription initiation factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in transcription initiation at RNA polymerase II promoter ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIID complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of transcription factor TFIID complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    TBP-associated factor 13
    Names
    CG10756-PA
    TBP-associated factor
    TBP-associated factor 18kD
    Taf13-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      20093088..20093849 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136180.4NP_610024.1  TBP-associated factor 13 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610024.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VIP1
      Related
      FBpp0080872
      Conserved Domains (1) summary
      cd07978
      Location:35124
      TAF13; The TATA Binding Protein (TBP) Associated Factor 13 (TAF13) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex