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    PAP13 purple acid phosphatase 13 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817838, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PAP13
    Official Full Name
    purple acid phosphatase 13
    Primary source
    TAIR:AT2G32770
    Locus tag
    AT2G32770
    See related
    Araport:AT2G32770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATPAP13; F24L7.9; F24L7_9; purple acid phosphatase 13; PURPLE ACID PHOSPHATASE 13
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    Genomic context

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    See PAP13 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (13895825..13898389)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene UV radiation resistance-associated protein Neighboring gene small ubiquitinrelated modifier 5 Neighboring gene ubiquitin-specific protease 1 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Purple acid phosphatases of Arabidopsis thaliana. Comparative analysis and differential regulation by phosphate deprivation. Li D, et al. J Biol Chem, 2002 Aug 2. PMID 12021284
    2. Expression patterns of purple acid phosphatase genes in Arabidopsis organs and functional analysis of AtPAP23 predominantly transcribed in flower. Zhu H, et al. Plant Mol Biol, 2005 Nov. PMID 16244908
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_128837.1
    NM_179867.1
    NM_201856.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables acid phosphatase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within dephosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    purple acid phosphatase 13
    NP_180836.1
    • purple acid phosphatase 13 (PAP13); FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 15 (TAIR:AT3G07130.1); Has 1271 Blast hits to 1238 proteins in 191 species: Archae - 5; Bacteria - 116; Metazoa - 179; Fungi - 94; Plants - 727; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
    NP_850198.1
    • purple acid phosphatase 13 (PAP13); CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 15 (TAIR:AT3G07130.1); Has 1681 Blast hits to 1667 proteins in 339 species: Archae - 9; Bacteria - 451; Metazoa - 191; Fungi - 73; Plants - 745; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).
    NP_973585.1
    • purple acid phosphatase 13 (PAP13); FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 15 (TAIR:AT3G07130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13895825..13898389
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_201856.4 → NP_973585.1  purple acid phosphatase 13 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973585.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48840, Q3EBP9, Q8RX38
      UniProtKB/TrEMBL
      A0A5S9X3F5, A0A654EY93
      Conserved Domains (3) summary
      PLN02533
      Location:46 → 543
      PLN02533; probable purple acid phosphatase
      cd00839
      Location:193 → 536
      MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
      pfam16656
      Location:69 → 185
      Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain

    2. NM_179867.1 → NP_850198.1  purple acid phosphatase 13 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850198.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48840
      Conserved Domains (3) summary
      cd00839
      Location:112 → 427
      MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
      pfam00149
      Location:115 → 336
      Metallophos; Calcineurin-like phosphoesterase
      pfam16656
      Location:27 → 104
      Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain

    3. NM_128837.1 → NP_180836.1  purple acid phosphatase 13 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180836.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X3F5, A0A654EY93
      Conserved Domains (3) summary
      PLN02533
      Location:46 → 514
      PLN02533; probable purple acid phosphatase
      cd00839
      Location:193 → 507
      MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
      pfam16656
      Location:69 → 185
      Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O48840.2

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