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    Chaperone DnaJ-domain superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814700, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Chaperone DnaJ-domain superfamily protein
    Primary source
    TAIR:AT2G01710
    Locus tag
    AT2G01710
    See related
    Araport:AT2G01710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T8O11.12; T8O11_12
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (315648..316993)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat family protein Neighboring gene ARM repeat superfamily protein Neighboring gene pseudo Neighboring gene Ribophorin I Neighboring gene cleavage and polyadenylation specificity factor 73 kDa subunit-II

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A DNA methylation reader complex that enhances gene transcription. Harris CJ, et al. Science, 2018 Dec 7. PMID 30523112, Free PMC Article
    2. A methylated-DNA-binding complex required for plant development mediates transcriptional activation of promoter methylated genes. Zhao QQ, et al. J Integr Plant Biol, 2019 Feb. PMID 30589221
    3. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    4. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    5. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_126232.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Chaperone DnaJ-domain superfamily protein
    NP_565276.1
    • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G64360.1); Has 8537 Blast hits to 8496 proteins in 1861 species: Archae - 67; Bacteria - 3520; Metazoa - 1920; Fungi - 549; Plants - 1113; Viruses - 8; Other Eukaryotes - 1360 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      315648..316993
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335073.1 → NP_001325329.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2U5, A0A5S9WWD3

    2. NM_126232.3 → NP_565276.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565276.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WWD3, Q9ZU99
      Conserved Domains (1) summary
      pfam00226
      Location:71 → 136
      DnaJ; DnaJ domain
    Nucleotide Protein
    Heading Accession and Version

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