U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SBI1 Leucine carboxyl methyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837541, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SBI1
    Official Full Name
    Leucine carboxyl methyltransferase
    Primary source
    TAIR:AT1G02100
    Locus tag
    AT1G02100
    See related
    Araport:AT1G02100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    LCMT1; leucine carboxyl methyl transferase 1; SUPPRESSOR OF BRI1; T7I23.16; T7I23_16
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SBI1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (389812..392816)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene transcription regulator Neighboring gene Proteasome component (PCI) domain protein Neighboring gene bZIP domain class transcription factor (DUF630 and DUF632) Neighboring gene GRAM domain family protein Neighboring gene RAS 5

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Methylation of a phosphatase specifies dephosphorylation and degradation of activated brassinosteroid receptors. Wu G, et al. Sci Signal, 2011 May 10. PMID 21558554, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help
    NM_100090.4
    NM_202011.1
    NM_202012.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables S-adenosylmethionine-dependent methyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in methylation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in negative regulation of brassinosteroid mediated signaling pathway IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Leucine carboxyl methyltransferase
    NP_171712.2
    • Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine carboxyl methyltransferase, LCTM1 1 (InterPro:IPR016651), Leucine carboxyl methyltransferase, eukaryotic (InterPro:IPR021121), Leucine carboxyl methyltransferase (InterPro:IPR007213); Has 605 Blast hits to 597 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 192; Fungi - 282; Plants - 33; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).
    NP_973740.1
    • Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine carboxyl methyltransferase, LCTM1 1 (InterPro:IPR016651), Leucine carboxyl methyltransferase, eukaryotic (InterPro:IPR021121), Leucine carboxyl methyltransferase (InterPro:IPR007213); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_973741.1
    • Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine carboxyl methyltransferase, LCTM1 1 (InterPro:IPR016651), Leucine carboxyl methyltransferase, eukaryotic (InterPro:IPR021121), Leucine carboxyl methyltransferase (InterPro:IPR007213); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      389812..392816
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100090.4 → NP_171712.2  Leucine carboxyl methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171712.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81910, Q570N7, Q8VY08
      UniProtKB/TrEMBL
      A0A5S9S6J3, A0A654E608
      Conserved Domains (1) summary
      cl17173
      Location:18 → 197
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    2. NM_202011.1 → NP_973740.1  Leucine carboxyl methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973740.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WMT4, F4HVW3
      Conserved Domains (1) summary
      cl17173
      Location:18 → 197
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    3. NM_202012.1 → NP_973741.1  Leucine carboxyl methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973741.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81910, Q570N7, Q8VY08
      UniProtKB/TrEMBL
      A0A5S9S6J3, A0A654E608
      Conserved Domains (1) summary
      cl17173
      Location:18 → 197
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VY08.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.