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    BSD domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837615, updated on 18-Sep-2024

    Summary

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    Official Full Name
    BSD domain-containing protein
    Primary source
    TAIR:AT1G10720
    Locus tag
    AT1G10720
    See related
    Araport:AT1G10720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T16B5.14; T16B5_14
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (3562841..3564850)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene EMBRYO SURROUNDING FACTOR-like protein Neighboring gene EMBRYO SURROUNDING FACTOR-like protein Neighboring gene Clathrin adaptor complexes medium subunit family protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene maternally expressed family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_100948.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BSD domain-containing protein
    NP_563876.1
    • BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 1569 Blast hits to 1461 proteins in 180 species: Archae - 0; Bacteria - 14; Metazoa - 740; Fungi - 179; Plants - 264; Viruses - 21; Other Eukaryotes - 351 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3562841..3564850
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100948.3 → NP_563876.1  BSD domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563876.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WC57, Q9SAD0
      Conserved Domains (1) summary
      smart00751
      Location:209 → 256
      BSD; domain in transcription factors and synapse-associated proteins
    Nucleotide Protein
    Heading Accession and Version

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