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    Eukaryotic porin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841462, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Eukaryotic porin family protein
    Primary source
    TAIR:AT1G50400
    Locus tag
    AT1G50400
    See related
    Araport:AT1G50400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14I3.2; F14I3_2
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (18668010..18670576)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Prolyl oligopeptidase family protein Neighboring gene pfkB-like carbohydrate kinase family protein Neighboring gene SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein Neighboring gene scarecrow-like 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_103923.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein import into mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Eukaryotic porin family protein
    NP_175457.1
    • Eukaryotic porin family protein; FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: anion transport, transmembrane transport; LOCATED IN: mitochondrial outer membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: translocase of the outer mitochondrial membrane 40 (TAIR:AT3G20000.1); Has 524 Blast hits to 524 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 249; Fungi - 143; Plants - 70; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      18668010..18670576
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103923.3 → NP_175457.1  Eukaryotic porin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175457.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SX55
      UniProtKB/TrEMBL
      A0A178WB68, A0A5S9WKQ7, A0A654ESZ8
      Conserved Domains (1) summary
      cd07305
      Location:28 → 308
      Porin3_Tom40; Translocase of outer mitochondrial membrane 40 (Tom40)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SX55.3

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