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    anoctamin-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843633, updated on 18-Sep-2024

    Summary

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    Official Full Name
    anoctamin-like protein
    Primary source
    TAIR:AT1G73020
    Locus tag
    AT1G73020
    See related
    Araport:AT1G73020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3N23.22; F3N23_22
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    16
    Sequence:
    Chromosome: 1; NC_003070.9 (27469496..27473660, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene PYR1-like 3 Neighboring gene inorganic pyrophosphatase 1 Neighboring gene ncRNA Neighboring gene SNF7 family protein Neighboring gene Mannose-binding lectin superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phospholipid scrambling by a TMEM16 homolog of Arabidopsis thaliana. Boccaccio A, et al. FEBS J, 2022 May. PMID 34775680, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001198459.1

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    anoctamin-like protein
    NP_001185388.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632).
    NP_177445.2
    • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632); Has 1198 Blast hits to 1128 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27469496..27473660 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334561.1 → NP_001320486.1  anoctamin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MFS9, Q5XVG1, Q9SSM5
      UniProtKB/TrEMBL
      A0A178WEA6, A0A5S9WTX6
      Conserved Domains (1) summary
      pfam04547
      Location:188 → 627
      Anoctamin; Calcium-activated chloride channel

    2. NM_105960.5 → NP_177445.2  anoctamin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177445.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MFS9, Q5XVG1, Q9SSM5
      UniProtKB/TrEMBL
      A0A178WEA6, A0A5S9WTX6
      Conserved Domains (1) summary
      pfam04547
      Location:188 → 627
      Anoctamin; Calcium-activated chloride channel

    3. NM_001198459.1 → NP_001185388.1  anoctamin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185388.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MFS9, Q5XVG1, Q9SSM5
      UniProtKB/TrEMBL
      A0A178WEA6, A0A5S9WTX6
      Conserved Domains (1) summary
      pfam04547
      Location:188 → 627
      Anoctamin; Calcium-activated chloride channel
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0MFS9.1

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