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    Chaperone DnaJ-domain superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844128, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Chaperone DnaJ-domain superfamily protein
    Primary source
    TAIR:AT1G77930
    Locus tag
    AT1G77930
    See related
    Araport:AT1G77930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DJC65; DNA J protein C65; F28K19.14; F28K19_14
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (29300971..29303570)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene bZIP transcription factor family protein Neighboring gene FANTASTIC four protein, putative (DUF3049) Neighboring gene Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Neighboring gene AGAMOUS-like 67 Neighboring gene repressor ROX1-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of chloroplast J proteins. Chiu CC, et al. PLoS One, 2013. PMID 23894646, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_106442.3
    NM_202437.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Chaperone DnaJ-domain superfamily protein
    NP_565163.1
    • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 19455 Blast hits to 19427 proteins in 3128 species: Archae - 161; Bacteria - 8834; Metazoa - 3140; Fungi - 1483; Plants - 1557; Viruses - 8; Other Eukaryotes - 4272 (source: NCBI BLink).
    NP_974166.1
    • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G36040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29300971..29303570
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334805.1 → NP_001321982.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASJ9
      Conserved Domains (2) summary
      COG0484
      Location:78 → 145
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      COG5407
      Location:10 → 143
      SEC63; Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport]

    2. NM_106442.3 → NP_565163.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565163.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJI9, A0A5S9WVA9, A0A654ERJ6, Q9SH08
      Conserved Domains (2) summary
      COG0484
      Location:78 → 145
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      COG2214
      Location:72 → 261
      CbpA; Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription]

    3. NM_202437.2 → NP_974166.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974166.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJI9, A0A5S9WVA9, A0A654ERJ6, Q9SH08
      Conserved Domains (2) summary
      COG0484
      Location:78 → 145
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      COG2214
      Location:72 → 261
      CbpA; Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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