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    PEX11A peroxin 11A [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841186, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PEX11A
    Official Full Name
    peroxin 11A
    Primary source
    TAIR:AT1G47750
    Locus tag
    AT1G47750
    See related
    Araport:AT1G47750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    peroxin 11A; T2E6.18; T2E6_18
    Summary
    member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.
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    Genomic context

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    See PEX11A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (17569256..17570249, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Primosome PriB/single-strand DNA-binding protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene PPPDE putative thiol peptidase family protein Neighboring gene AGAMOUS-like 102 Neighboring gene F-box and associated interaction domains-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Peroxisomes Extend Peroxules in a Fast Response to Stress via a Reactive Oxygen Species-Mediated Induction of the Peroxin PEX11a. Rodríguez-Serrano M, et al. Plant Physiol, 2016 Jul. PMID 27208303, Free PMC Article
    2. The Arabidopsis chloroplast division protein DYNAMIN-RELATED PROTEIN5B also mediates peroxisome division. Zhang X, et al. Plant Cell, 2010 Feb. PMID 20179140, Free PMC Article
    3. The PEROXIN11 protein family controls peroxisome proliferation in Arabidopsis. Orth T, et al. Plant Cell, 2007 Jan. PMID 17220199, Free PMC Article
    4. Functional classification of Arabidopsis peroxisome biogenesis factors proposed from analyses of knockdown mutants. Nito K, et al. Plant Cell Physiol, 2007 Jun. PMID 17478547
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PEX11a and peroxule formation play a key role in regulating stress perception and fast cell responses to environmental cues.
      Title: Peroxisomes Extend Peroxules in a Fast Response to Stress via a Reactive Oxygen Species-Mediated Induction of the Peroxin PEX11a.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_103668.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables identical protein binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within peroxisome fission IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within peroxisome organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in peroxisomal membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peroxin 11A
    NP_564514.1
    • peroxin 11A (PEX11A); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11B (TAIR:AT3G47430.1); Has 271 Blast hits to 271 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 15; Plants - 188; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17569256..17570249 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103668.3 → NP_564514.1  peroxin 11A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564514.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LGI6, Q9FZF1
      UniProtKB/TrEMBL
      A0A178W7Y4, A0A5S9WMT8
      Conserved Domains (1) summary
      pfam05648
      Location:18 → 245
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FZF1.1

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