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    polarity axis stabilization protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843730, updated on 18-Sep-2024

    Summary

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    Official Full Name
    polarity axis stabilization protein
    Primary source
    TAIR:AT1G73930
    Locus tag
    AT1G73930
    See related
    Araport:AT1G73930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2P9.20; F2P9_20
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (27795040..27798005, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene actin-related proteins 4A Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene tumor necrosis factor receptor family protein Neighboring gene Transmembrane Fragile-X-F-associated protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036201.2
    NM_106052.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    polarity axis stabilization protein
    NP_001031278.1
    • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1630 (InterPro:IPR012860); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_177533.1
    • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1630 (InterPro:IPR012860); Has 290 Blast hits to 263 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 30; Plants - 49; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27795040..27798005 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036201.2 → NP_001031278.1  polarity axis stabilization protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031278.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLK4, B9DFN8, Q9C9B4
      Conserved Domains (2) summary
      pfam08616
      Location:227 → 319
      SPA; Stabilization of polarity axis
      cl11519
      Location:124 → 204
      DENN; DENN (AEX-3) domain

    2. NM_106052.3 → NP_177533.1  polarity axis stabilization protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177533.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLK4, B9DFN8, Q9C9B4
      Conserved Domains (2) summary
      pfam08616
      Location:227 → 319
      SPA; Stabilization of polarity axis
      cl11519
      Location:124 → 204
      DENN; DENN (AEX-3) domain
    Nucleotide Protein
    Heading Accession and Version

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