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    SP1L5 SPIRAL1-like5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828449, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SP1L5
    Official Full Name
    SPIRAL1-like5
    Primary source
    TAIR:AT4G23496
    Locus tag
    AT4G23496
    See related
    Araport:AT4G23496
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    SPIRAL1-like5
    Summary
    Belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion.
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    Genomic context

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    See SP1L5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (12257513..12258670, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene PLAC8 family protein Neighboring gene fringe-like protein (DUF604) Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Pectin lyase-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SPIRAL1 encodes a plant-specific microtubule-localized protein required for directional control of rapidly expanding Arabidopsis cells. Nakajima K, et al. Plant Cell, 2004 May. PMID 15084720, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118480.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cortical microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    SPIRAL1-like5
    NP_567685.1
    • SPIRAL1-like5 (SP1L5); BEST Arabidopsis thaliana protein match is: SPIRAL1-like2 (TAIR:AT1G69230.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12257513..12258670 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118480.4 → NP_567685.1  SPIRAL1-like5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567685.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LGD1
      UniProtKB/TrEMBL
      A0A178V3J3, A0A5S9XV88
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LGD1.1

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