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    Plasma-membrane choline transporter family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830020, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Plasma-membrane choline transporter family protein
    Primary source
    TAIR:AT4G38640
    Locus tag
    AT4G38640
    See related
    Araport:AT4G38640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9A14.3
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (18059614..18062347, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene myb domain protein 4 Neighboring gene regulatory particle non-ATPase 10 Neighboring gene Glycosyl hydrolase family 10 protein Neighboring gene Pathogenesis-related thaumatin superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_120025.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Plasma-membrane choline transporter family protein
    NP_568045.1
    • Plasma-membrane choline transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      18059614..18062347 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120025.3 → NP_568045.1  Plasma-membrane choline transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568045.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V1K3, A0A5S9Y046, A0A654FWQ0, Q93YN6
      Conserved Domains (1) summary
      pfam04515
      Location:229 → 523
      Choline_transpo; Plasma-membrane choline transporter
    Nucleotide Protein
    Heading Accession and Version

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