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    RR17 response regulator 17 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824805, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RR17
    Official Full Name
    response regulator 17
    Primary source
    TAIR:AT3G56380
    Locus tag
    AT3G56380
    See related
    Araport:AT3G56380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARR17; response regulator 17; RESPONSE REGULATOR 17
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    Genomic context

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    See RR17 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (20905264..20906397)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene WRKY transcription factor-like protein Neighboring gene WRKY DNA-binding protein 70

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Asymmetric distribution of cytokinins determines root hydrotropism in Arabidopsis thaliana. Chang J, et al. Cell Res, 2019 Dec. PMID 31601978, Free PMC Article
    2. Two-component signal transduction pathways in Arabidopsis. Hwang I, et al. Plant Physiol, 2002 Jun. PMID 12068096, Free PMC Article
    3. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Asymmetric distribution of cytokinins determines root hydrotropism in Arabidopsis thaliana.
      Title: Asymmetric distribution of cytokinins determines root hydrotropism in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_115496.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphorelay response regulator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytokinin-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cytokinin-activated signaling pathway TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in phosphorelay signal transduction system IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    response regulator 17
    NP_567037.1
    • response regulator 17 (RR17); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 16 (TAIR:AT2G40670.1); Has 39813 Blast hits to 39289 proteins in 2430 species: Archae - 260; Bacteria - 34490; Metazoa - 15; Fungi - 615; Plants - 1410; Viruses - 6; Other Eukaryotes - 3017 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20905264..20906397
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339792.1 → NP_001326774.1  response regulator 17 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQB0, A0A5S9XLB7, A0A654FGW7
      Conserved Domains (1) summary
      cd17581
      Location:22 → 145
      REC_typeA_ARR; phosphoacceptor receiver (REC) domain of type A Arabidopsis response regulators (ARRs) and similar proteins

    2. NM_115496.2 → NP_567037.1  response regulator 17 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567037.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FPR6, Q9LY02
      UniProtKB/TrEMBL
      A0A654FGW7
      Conserved Domains (1) summary
      cd17581
      Location:22 → 144
      REC_typeA_ARR; phosphoacceptor receiver (REC) domain of type A Arabidopsis response regulators (ARRs) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FPR6.1

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