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    cytochrome C oxidase subunit [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825413, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cytochrome C oxidase subunit
    Primary source
    TAIR:AT3G62400
    Locus tag
    AT3G62400
    See related
    Araport:AT3G62400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (23089596..23090821)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene heme binding protein Neighboring gene F-box/associated interaction domain protein Neighboring gene TRICHOME BIREFRINGENCE-LIKE 6 Neighboring gene CP12 domain-containing protein 2 Neighboring gene basic region/leucine zipper motif 53

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001340157.1
    NM_180407.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    part_of respiratory chain complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome C oxidase subunit
    NP_001319820.1
    • unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_850738.1
    • unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      23089596..23090821
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180407.4 → NP_850738.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850738.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LZQ0

    2. NM_001340157.1 → NP_001319820.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q27GK0, Q84JY6, Q9LZQ0
      UniProtKB/TrEMBL
      A0A178VJP0, A0A5S9XN47
      Conserved Domains (1) summary
      PLN03155
      Location:1 → 63
      PLN03155; cytochrome c oxidase subunit 5C; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LZQ0.1

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