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    D111/G-patch domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830753, updated on 18-Sep-2024

    Summary

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    Official Full Name
    D111/G-patch domain-containing protein
    Primary source
    TAIR:AT5G08535
    Locus tag
    AT5G08535
    See related
    Araport:AT5G08535
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (2762029..2763453)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene Duplicated homeodomain-like superfamily protein Neighboring gene 51 kDa subunit of complex I Neighboring gene ribosomal RNA small subunit methyltransferase J Neighboring gene ncRNA Neighboring gene GC-rich sequence DNA-binding factor-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001343016.1
    NM_001343017.1
    NM_120939.3
    NM_180463.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    D111/G-patch domain-containing protein
    NP_568199.1
    • D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: D111/G-patch domain-containing protein (TAIR:AT3G52350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_850794.1
    • D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: D111/G-patch domain-containing protein (TAIR:AT3G52350.1); Has 916 Blast hits to 916 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 577; Fungi - 99; Plants - 184; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2762029..2763453
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120939.3 → NP_568199.1  D111/G-patch domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568199.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FZH1, A0A7G2F6J0, Q8GXG0, Q8LDZ5
      Conserved Domains (1) summary
      pfam01585
      Location:41 → 85
      G-patch; G-patch domain

    2. NM_001343016.1 → NP_001330978.1  D111/G-patch domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FZH1, Q8LDZ5, Q94EI2

    3. NM_001343017.1 → NP_001330977.1  D111/G-patch domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FZH1, Q8LDZ5, Q94EI2

    4. NM_180463.1 → NP_850794.1  D111/G-patch domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850794.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FZH1, Q8LDZ5, Q94EI2
      Conserved Domains (1) summary
      pfam01585
      Location:16 → 60
      G-patch; G-patch domain
    Nucleotide Protein
    Heading Accession and Version

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