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    AAP5 amino acid permease 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841013, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AAP5
    Official Full Name
    amino acid permease 5
    Primary source
    TAIR:AT1G44100
    Locus tag
    AT1G44100
    See related
    Araport:AT1G44100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    amino acid permease 5; T7O23.19; T7O23_19
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    Genomic context

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    See AAP5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (16764392..16767685, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene glycine-rich protein Neighboring gene gibberellin 20-oxidase 5 Neighboring gene ncRNA Neighboring gene Cyclin A1;1 Neighboring gene CELLULOSE SYNTHASE INTERACTIVE 2 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Low and high affinity amino acid H+-cotransporters for cellular import of neutral and charged amino acids. Fischer WN, et al. Plant J, 2002 Mar. PMID 12148530
    2. Substrate specificity and expression profile of amino acid transporters (AAPs) in Arabidopsis. Fischer WN, et al. J Biol Chem, 1995 Jul 7. PMID 7608199
    3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
    4. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_103536.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables amino acid transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables amino acid transmembrane transporter activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables basic amino acid transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within amino acid transmembrane transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within basic amino acid transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    amino acid permease 5
    NP_175076.2
    • amino acid permease 5 (AAP5); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 3 (TAIR:AT1G77380.1); Has 2256 Blast hits to 2241 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 536; Fungi - 289; Plants - 1230; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      16764392..16767685 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103536.4 → NP_175076.2  amino acid permease 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175076.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q39136, Q8GUM3, Q9C6Y2
      UniProtKB/TrEMBL
      A0A178W5P0, A0A5S9WMF6, A0A654EFY3
      Conserved Domains (1) summary
      pfam01490
      Location:28 → 468
      Aa_trans; Transmembrane amino acid transporter protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GUM3.1

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