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    CG9839 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41055, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG9839provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037633
    Locus tag
    Dmel_CG9839
    See related
    AllianceGenome:FB:FBgn0037633
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG9839
    Summary
    Orthologous to human PGBD4 (piggyBac transposable element derived 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG9839 in Genome Data Viewer
    Location:
    85B1-85B2; 3-48 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (8803471..8805802, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (4629193..4631524, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene PFTAIRE-interacting factor 1B Neighboring gene PFTAIRE-interacting factor 1A Neighboring gene uncharacterized protein Neighboring gene Ionotropic receptor 85a Neighboring gene Chaperonin containing TCP1 subunit 7 Neighboring gene hinge2 Neighboring gene uncharacterized protein Neighboring gene aaquetzalli

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular evolutionary analysis of the widespread piggyBac transposon family and related "domesticated" sequences. Sarkar A, et al. Mol Genet Genomics, 2003 Nov. PMID 12955498
    2. Predicting novel candidate human obesity genes and their site of action by systematic functional screening in Drosophila. Agrawal N, et al. PLoS Biol, 2021 Nov. PMID 34748544, Free PMC Article
    3. Histone chaperones ASF1 and NAP1 differentially modulate removal of active histone marks by LID-RPD3 complexes during NOTCH silencing. Moshkin YM, et al. Mol Cell, 2009 Sep 24. PMID 19782028
    4. Identification of regulators of the three-dimensional polycomb organization by a microscopy-based genome-wide RNAi screen. Gonzalez I, et al. Mol Cell, 2014 May 8. PMID 24703951
    5. Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster. Okada H, et al. Nat Commun, 2016 Sep 1. PMID 27582081, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG9839-PA
    CG9839-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      8803471..8805802 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275459.1 → NP_001262388.1  uncharacterized protein Dmel_CG9839, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262388.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHL1
      Conserved Domains (2) summary
      pfam13842
      Location:570 → 602
      Tnp_zf-ribbon_2; DDE_Tnp_1-like zinc-ribbon
      pfam13843
      Location:141 → 490
      DDE_Tnp_1_7; Transposase IS4

    2. NM_141579.3 → NP_649836.1  uncharacterized protein Dmel_CG9839, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649836.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHL1
      Related
      FBpp0081416
      Conserved Domains (2) summary
      pfam13842
      Location:570 → 602
      Tnp_zf-ribbon_2; DDE_Tnp_1-like zinc-ribbon
      pfam13843
      Location:141 → 490
      DDE_Tnp_1_7; Transposase IS4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VHL1 Q9VHL1

    Gene LinkOut

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