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    CG5080 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33299, updated on 17-Dec-2024

    Summary

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    Official Symbol
    CG5080provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031313
    Locus tag
    Dmel_CG5080
    See related
    AllianceGenome:FB:FBgn0031313
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CT16297; Dmel\CG5080
    Summary
    Located in plasma membrane. Is expressed in several structures, including adult head; embryonic/larval lateral glial cell; ganglia; larval muscle cell; and visceral mesoderm derivative. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5080 in Genome Data Viewer
    Location:
    21F1-21F1; 2-2 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (1160290..1163886, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (1160290..1163886, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Vacuolar protein sorting 29 Neighboring gene capulet Neighboring gene antisense RNA:CR43767 Neighboring gene Transport and Golgi organization 14 Neighboring gene Integrator 14 Neighboring gene uncharacterized protein Neighboring gene Phospholipase A2 activator protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. mef2 activity levels differentially affect gene expression during Drosophila muscle development. Elgar SJ, et al. Proc Natl Acad Sci U S A, 2008 Jan 22. PMID 18198273, Free PMC Article
    2. Differential regulation of mesodermal gene expression by Drosophila cell type-specific Forkhead transcription factors. Zhu X, et al. Development, 2012 Apr. PMID 22378636, Free PMC Article
    3. Two sequential gene expression programs bridged by cell division support long-distance collective cell migration. Sun J, et al. Development, 2024 May 15. PMID 38646822, Free PMC Article
    4. The genomic response of the Drosophila embryo to JNK signaling. Jasper H, et al. Dev Cell, 2001 Oct. PMID 11703947
    5. GMAP is an Atg8a-interacting protein that regulates Golgi turnover in Drosophila. Rahman A, et al. Cell Rep, 2022 May 31. PMID 35649355, Free PMC Article

    See all (42) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5080-PA
    CG5080-PB
    CG5080-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      1160290..1163886 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134734.3 → NP_608578.1  uncharacterized protein Dmel_CG5080, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608578.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K3E2
      Related
      FBpp0077646
      Conserved Domains (1) summary
      COG1196
      Location:32 → 314
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. NM_001272929.1 → NP_001259858.1  uncharacterized protein Dmel_CG5080, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259858.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K3E2
      Conserved Domains (1) summary
      COG1196
      Location:32 → 314
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. NM_164406.2 → NP_722684.1  uncharacterized protein Dmel_CG5080, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_722684.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K3E2
      Related
      FBpp0077647
      Conserved Domains (1) summary
      COG1196
      Location:32 → 314
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7K3E2 Q7K3E2

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