U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    beat-IIb beaten path IIb [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42082, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    beat-IIbprovided by FlyBase
    Official Full Name
    beaten path IIbprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038494
    Locus tag
    Dmel_CG4135
    See related
    AllianceGenome:FB:FBgn0038494
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    beat IIb; Beat-IIb; CG14337; CG4135; CT13620; Dmel\CG4135
    Summary
    Enables cell adhesion receptor activity. Involved in synapse assembly. Is active in postsynaptic membrane. Is expressed in adult head. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See beat-IIb in Genome Data Viewer
    Location:
    89F3-90A1; 3-60 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (17232253..17265049, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (13057975..13090771, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Mucin related 89F Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44258 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Brain wiring determinants uncovered by integrating connectomes and transcriptomes. Yoo J, et al. Curr Biol, 2023 Sep 25. PMID 37647901
    2. Drosophila Fezf coordinates laminar-specific connectivity through cell-intrinsic and cell-extrinsic mechanisms. Peng J, et al. Elife, 2018 Mar 7. PMID 29513217, Free PMC Article
    3. Complex formation of immunoglobulin superfamily molecules Side-IV and Beat-IIb regulates synaptic specificity. Osaka J, et al. Cell Rep, 2024 Feb 27. PMID 38381608
    4. The Beat generation: a multigene family encoding IgSF proteins related to the Beat axon guidance molecule in Drosophila. Pipes GC, et al. Development, 2001 Nov. PMID 11714679
    5. Two sequential gene expression programs bridged by cell division support long-distance collective cell migration. Sun J, et al. Development, 2024 May 15. PMID 38646822, Free PMC Article

    See all (37) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables cell adhesion receptor activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in synapse assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    beaten path IIb
    Names
    CG4135-PA
    CG4135-PC
    beat-IIb-PA
    beat-IIb-PC

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      17232253..17265049 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001170164.2 → NP_001163635.2  beaten path IIb, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163635.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8WHK6, E1JIN2
      Conserved Domains (1) summary
      smart00410
      Location:108 → 198
      IG_like; Immunoglobulin like

    2. NM_142356.3 → NP_650613.2  beaten path IIb, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650613.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8WHK6, Q9VEL7
      Related
      FBpp0082852
      Conserved Domains (1) summary
      smart00410
      Location:108 → 198
      IG_like; Immunoglobulin like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1JIN2 E1JIN2
    Q95UI5 Q95UI5
    Q9VEL7 Q9VEL7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools