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    Obp57c Odorant-binding protein 57c [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37311, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Obp57cprovided by FlyBase
    Official Full Name
    Odorant-binding protein 57cprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034509
    Locus tag
    Dmel_CG13421
    See related
    AllianceGenome:FB:FBgn0034509
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    57c; BcDNA:RH68952; CG13421; DmelObp57c; Dmel\CG13421; Obp57a; obp57c; OBP57c
    Summary
    Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of smell. Predicted to be located in extracellular region. Is expressed in antenna; labellum; and sense organ. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Obp57c in Genome Data Viewer
    Location:
    57A4-57A4; 2-91 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (20503584..20504202)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (16391089..16391707)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene sidestep VIII Neighboring gene long non-coding RNA:CR44643 Neighboring gene Odorant-binding protein 57b Neighboring gene Odorant-binding protein 57a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel odorant-binding proteins expressed in the taste tissue of the fly. Koganezawa M, et al. Chem Senses, 2002 May. PMID 12006372
    2. Aging and Autophagic Function Influences the Progressive Decline of Adult Drosophila Behaviors. Ratliff EP, et al. PLoS One, 2015. PMID 26182057, Free PMC Article
    3. An odorant-binding protein required for suppression of sweet taste by bitter chemicals. Jeong YT, et al. Neuron, 2013 Aug 21. PMID 23972598, Free PMC Article
    4. Rapid evolution of two odorant-binding protein genes, Obp57d and Obp57e, in the Drosophila melanogaster species group. Matsuo T. Genetics, 2008 Feb. PMID 18245367, Free PMC Article
    5. Regulatory divergence in Drosophila melanogaster and D. simulans, a genomewide analysis of allele-specific expression. Graze RM, et al. Genetics, 2009 Oct. PMID 19667135, Free PMC Article

    See all (48) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables odorant binding NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in response to odorant NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 57c
    Names
    CG13421-PA
    Obp57c-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      20503584..20504202
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137637.3 → NP_611481.1  Odorant-binding protein 57c [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611481.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A8DYJ8, Q4V3N2, Q9V931
      UniProtKB/TrEMBL
      A0A1B2AK36
      Related
      FBpp0085604
      Conserved Domains (1) summary
      smart00708
      Location:28 → 131
      PhBP; Insect pheromone/odorant binding protein domains
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V931.1 Q9V931

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