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    Obp56e Odorant-binding protein 56e [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37267, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Obp56eprovided by FlyBase
    Official Full Name
    Odorant-binding protein 56eprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034471
    Locus tag
    Dmel_CG8462
    See related
    AllianceGenome:FB:FBgn0034471
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    56e; CG8462; DmelObp56e; Dmel\CG8462; obp56e; OBP56e
    Summary
    Predicted to enable odorant binding activity. Involved in sexual reproduction. Located in extracellular space. Is expressed in antenna and sense organ. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Obp56e in Genome Data Viewer
    Location:
    56E2-56E2; 2-90 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (19712345..19712932)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (15599850..15600437)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Odorant-binding protein 56c Neighboring gene Odorant-binding protein 56d Neighboring gene antisense RNA:CR44509 Neighboring gene Odorant-binding protein 56f Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A conserved odorant binding protein is required for essential amino acid detection in Drosophila. Rihani K, et al. Commun Biol, 2019. PMID 31799428, Free PMC Article
    2. Cyclophosphamide in Drosophila promotes genes and transposable elements differential expression and mitochondrial dysfunction. Stoffel TJR, et al. Comp Biochem Physiol C Toxicol Pharmacol, 2020 Apr. PMID 31982542
    3. Association of polymorphisms in odorant-binding protein genes with variation in olfactory response to benzaldehyde in Drosophila. Wang P, et al. Genetics, 2007 Nov. PMID 17720903, Free PMC Article
    4. Effect of spaceflight on the circadian rhythm, lifespan and gene expression of Drosophila melanogaster. Ma L, et al. PLoS One, 2015. PMID 25798821, Free PMC Article
    5. The seminal odorant binding protein Obp56g is required for mating plug formation and male fertility in Drosophila melanogaster. Brown NC, et al. Elife, 2023 Dec 21. PMID 38126735, Free PMC Article

    See all (52) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in sexual reproduction HEP PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    located_in extracellular space HDA PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 56e
    Names
    CG8462-PA
    CG8462-PB
    Obp56e-PA
    Obp56e-PB
    odorant binding protein 56e

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      19712345..19712932
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137601.4 → NP_611445.1  Odorant-binding protein 56e, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611445.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A9QHS4, Q7K088
      Related
      FBpp0085634
      Conserved Domains (1) summary
      pfam01395
      Location:21 → 128
      PBP_GOBP; PBP/GOBP family

    2. NM_001299691.1 → NP_001286620.1  Odorant-binding protein 56e, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286620.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LFW3, A9QHS4
      Conserved Domains (1) summary
      pfam01395
      Location:20 → 127
      PBP_GOBP; PBP/GOBP family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4LFW3 A0A0B4LFW3
    Q7K088 Q7K088

    Gene LinkOut

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