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    Cimip6 ciliary microtubule inner protein 6 [ Mus musculus (house mouse) ]

    Gene ID: 75087, updated on 27-Dec-2024

    Summary

    Official Symbol
    Cimip6provided by MGI
    Official Full Name
    ciliary microtubule inner protein 6provided by MGI
    Primary source
    MGI:MGI:1922337
    See related
    Ensembl:ENSMUSG00000040919 AllianceGenome:MGI:1922337
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930505A04Rik
    Summary
    Is expressed in reproductive system; thyroid gland; and vascular system. Orthologous to human CIMIP6 (ciliary microtubule inner protein 6). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis adult (RPKM 31.7) See more
    Orthologs
    NEW
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    Genomic context

    See Cimip6 in Genome Data Viewer
    Location:
    11 A4; 11 17.93 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (30376006..30421829, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (30426006..30471829, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_29057 Neighboring gene predicted gene, 40820 Neighboring gene STARR-seq mESC enhancer starr_29058 Neighboring gene stress-induced phosphoprotein 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_29059 Neighboring gene predicted gene, 53677 Neighboring gene STARR-seq mESC enhancer starr_29061 Neighboring gene acylphosphatase 2, muscle type Neighboring gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 pseudogene Neighboring gene Pea15a pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein C2orf73 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100394.1NP_001093864.1  uncharacterized protein C2orf73 homolog

      See identical proteins and their annotated locations for NP_001093864.1

      Status: VALIDATED

      Source sequence(s)
      AK015698, BC049719
      Consensus CDS
      CCDS48764.1
      UniProtKB/Swiss-Prot
      Q5SPV6, Q810N4, Q9D580
      Related
      ENSMUSP00000045288.8, ENSMUST00000041763.14
      Conserved Domains (1) summary
      pfam15667
      Location:46233
      GDWWSH; Protein of unknown function with motif GDWWSH

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      30376006..30421829 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)