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    CG1806 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32163, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG1806provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030360
    Locus tag
    Dmel_CG1806
    See related
    AllianceGenome:FB:FBgn0030360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG1806
    Summary
    Predicted to be located in plasma membrane. Predicted to be part of dystrophin-associated glycoprotein complex. Predicted to be active in sarcolemma. Is expressed in several structures, including embryonic anal pad; embryonic dorsal epidermis; embryonic head epidermis; embryonic hypopharynx; and gut section. Orthologous to human SSPN (sarcospan). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG1806 in Genome Data Viewer
    Location:
    11A1-11A1; 1-38 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (12007176..12009904)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (11901209..11903937)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene furrowed Neighboring gene uncharacterized protein Neighboring gene regucalcin Neighboring gene Chromatin accessibility complex 16kD protein Neighboring gene LSM12 homolog a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic interaction screens identify a role for hedgehog signaling in Drosophila border cell migration. Geisbrecht ER, et al. Dev Dyn, 2013 May. PMID 23335293, Free PMC Article
    2. A genetic screen for olfactory habituation mutations in Drosophila: analysis of novel foraging alleles and an underlying neural circuit. Eddison M, et al. PLoS One, 2012. PMID 23284741, Free PMC Article
    3. Genomic response to selection for postponed senescence in Drosophila. Wilson RH, et al. Mech Ageing Dev, 2013 Mar. PMID 23262286, Free PMC Article
    4. A buoyancy-based screen of Drosophila larvae for fat-storage mutants reveals a role for Sir2 in coupling fat storage to nutrient availability. Reis T, et al. PLoS Genet, 2010 Nov 11. PMID 21085633, Free PMC Article
    5. A Connected Network of Interacting Proteins Is Involved in Human-Tau Toxicity in Drosophila. Feuillette S, et al. Front Neurosci, 2020. PMID 32116515, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    part_of dystrophin-associated glycoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in sarcolemma IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG1806-PA
    CG1806-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      12007176..12009904
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132545.3 → NP_572773.1  uncharacterized protein Dmel_CG1806, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572773.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q960J0, Q9VYR3
      Related
      FBpp0073418

    2. NM_001298218.1 → NP_001285147.1  uncharacterized protein Dmel_CG1806, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285147.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q960J0, Q9VYR3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VYR3 Q9VYR3

    Gene LinkOut

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