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    Glycosyl hydrolase family 10 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829526, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Glycosyl hydrolase family 10 protein
    Primary source
    TAIR:AT4G33840
    Locus tag
    AT4G33840
    See related
    Araport:AT4G33840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17I5.30; F17I5_30
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (16223501..16226153, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene Glycosyl hydrolase family 10 protein Neighboring gene miscRNA Neighboring gene Glycosyl hydrolase family 10 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_119541.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Glycosyl hydrolase family 10 protein
    NP_195110.3
    • Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16223501..16226153 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119541.4 → NP_195110.3  Glycosyl hydrolase family 10 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195110.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FV96, O81752, Q6NQI6
      Conserved Domains (2) summary
      smart00633
      Location:258 → 506
      Glyco_10; Glycosyl hydrolase family 10
      cl19911
      Location:44 → 163
      CBM_4_9; Carbohydrate binding domain
    Nucleotide Protein
    Heading Accession and Version

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