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    Glycosyl hydrolase family 10 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829528, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Glycosyl hydrolase family 10 protein
    Primary source
    TAIR:AT4G33860
    Locus tag
    AT4G33860
    See related
    Araport:AT4G33860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17I5.50; F17I5_50
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (16229908..16232365, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Glycosyl hydrolase family 10 protein Neighboring gene miscRNA Neighboring gene Ribosomal protein S14p/S29e family protein Neighboring gene Peroxidase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_119543.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Glycosyl hydrolase family 10 protein
    NP_195112.2
    • Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33840.1); Has 2031 Blast hits to 2022 proteins in 431 species: Archae - 10; Bacteria - 1156; Metazoa - 20; Fungi - 351; Plants - 271; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16229908..16232365 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119543.3 → NP_195112.2  Glycosyl hydrolase family 10 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195112.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XYE0, F4JJU9
      Conserved Domains (2) summary
      smart00633
      Location:258 → 506
      Glyco_10; Glycosyl hydrolase family 10
      cl19911
      Location:44 → 164
      CBM_4_9; Carbohydrate binding domain
    Nucleotide Protein
    Heading Accession and Version

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