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    microfibrillar-associated protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826419, updated on 18-Sep-2024

    Summary

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    Official Full Name
    microfibrillar-associated protein-like protein
    Primary source
    TAIR:AT4G08580
    Locus tag
    AT4G08580
    See related
    Araport:AT4G08580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T3F12.11
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (5461398..5463907)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pumilio 15 Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene ORTHRUS-like protein Neighboring gene uncharacterized protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001340596.1
    NM_116927.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    microfibrillar-associated protein-like protein
    NP_192598.1
    • microfibrillar-associated protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Micro-fibrillar-associated 1, C-terminal (InterPro:IPR009730); BEST Arabidopsis thaliana protein match is: microfibrillar-associated protein-related (TAIR:AT5G17900.1); Has 41823 Blast hits to 26074 proteins in 1611 species: Archae - 271; Bacteria - 4310; Metazoa - 18112; Fungi - 3731; Plants - 1727; Viruses - 240; Other Eukaryotes - 13432 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      5461398..5463907
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116927.5 → NP_192598.1  microfibrillar-associated protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192598.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V589, A0A384KUA2, C0Z3G2, O22281
      Conserved Domains (1) summary
      pfam06991
      Location:173 → 393
      MFAP1; Microfibril-associated/Pre-mRNA processing

    2. NM_001340596.1 → NP_001328706.1  microfibrillar-associated protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V589, A0A384KUA2, C0Z3G2, O22281
      Conserved Domains (1) summary
      pfam06991
      Location:173 → 393
      MFAP1; Microfibril-associated/Pre-mRNA processing
    Nucleotide Protein
    Heading Accession and Version

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