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    hypothetical protein (DUF626) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816589, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF626)
    Primary source
    TAIR:AT2G20625
    Locus tag
    AT2G20625
    See related
    Araport:AT2G20625
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23N11.15; F23N11_15
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (8896154..8897218, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF626) Neighboring gene ncRNA Neighboring gene PP2C induced by AVRRPM1 Neighboring gene protein kinase and Mad3-BUB1-I domain-containing protein Neighboring gene RING/U-box superfamily protein Neighboring gene ralf-like 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001335702.1
    NM_127626.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF626)
    NP_179654.2
    • Protein of unknown function (DUF626); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT2G20620.1); Has 62 Blast hits to 62 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8896154..8897218 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127626.2 → NP_179654.2  hypothetical protein (DUF626) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179654.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8S8D8
      Conserved Domains (1) summary
      cl19902
      Location:129 → 174
      DUF626; Protein of unknown function (DUF626)

    2. NM_001335702.1 → NP_001324778.1  hypothetical protein (DUF626) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IVH7, Q8S8D8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8S8D8.1

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