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    Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843186, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Major facilitator superfamily protein
    Primary source
    TAIR:AT1G68570
    Locus tag
    AT1G68570
    See related
    Araport:AT1G68570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtNPF3.1; F24J5.19; F24J5_19; NPF3.1; NRT1/ PTR family 3.1
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (25746697..25750291)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene alpha-xylosidase 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Agenet and bromo-adjacent homology (BAH) domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. N availability modulates the role of NPF3.1, a gibberellin transporter, in GA-mediated phenotypes in Arabidopsis. David LC, et al. Planta, 2016 Dec. PMID 27541496
    2. The Arabidopsis NPF3 protein is a GA transporter. Tal I, et al. Nat Commun, 2016 May 3. PMID 27139299, Free PMC Article
    3. Members of the NPF3 transporter subfamily encode pathogen-inducible nitrate/nitrite transporters in grapevine and Arabidopsis. Pike S, et al. Plant Cell Physiol, 2014 Jan. PMID 24259683
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. gene expression is promoted by limiting nitrogen nutrition
      Title: N availability modulates the role of NPF3.1, a gibberellin transporter, in GA-mediated phenotypes in Arabidopsis.
    2. AtNPF3.1 is a low-affinity transporter for both nitrate and nitrite. AtNPF3.1 is up-regulated in the leaves of plants infected by Erysiphe necator. [AtNPF3.1]
      Title: Members of the NPF3 transporter subfamily encode pathogen-inducible nitrate/nitrite transporters in grapevine and Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    NM_001334368.1
    NM_105528.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within gibberellic acid homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in intracellular vesicle IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Major facilitator superfamily protein
    NP_177024.1
    • Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 5938 Blast hits to 5565 proteins in 1029 species: Archae - 0; Bacteria - 2262; Metazoa - 736; Fungi - 385; Plants - 2206; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25746697..25750291
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105528.5 → NP_177024.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177024.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SX20
      UniProtKB/TrEMBL
      A0A178WGE3, A0A5S9WQS7, A0A654EM61
      Conserved Domains (1) summary
      cd17415
      Location:27 → 564
      MFS_NPF3; NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters

    2. NM_001334368.1 → NP_001321309.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQH5, A0A654EM61
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SX20.1

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