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    WAK3 wall associated kinase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838719, updated on 18-Sep-2024

    Summary

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    Official Symbol
    WAK3
    Official Full Name
    wall associated kinase 3
    Primary source
    TAIR:AT1G21240
    Locus tag
    AT1G21240
    See related
    Araport:AT1G21240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16F4.8; F16F4_8; wall associated kinase 3
    Summary
    encodes a wall-associated kinase
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    Genomic context

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    See WAK3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (7434235..7436830)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene wall associated kinase 5 Neighboring gene ncRNA Neighboring gene Protein kinase superfamily protein Neighboring gene cell wall-associated kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A cluster of five cell wall-associated receptor kinase genes, Wak1-5, are expressed in specific organs of Arabidopsis. He ZH, et al. Plant Mol Biol, 1999 Apr. PMID 10380805
    2. Interaction of the Arabidopsis receptor protein kinase Wak1 with a glycine-rich protein, AtGRP-3. Park AR, et al. J Biol Chem, 2001 Jul 13. PMID 11335717
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001332490.1
    NM_101977.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables polysaccharide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    wall associated kinase 3
    NP_173547.1
    • wall associated kinase 3 (WAK3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: cell wall-associated kinase (TAIR:AT1G21250.1); Has 137245 Blast hits to 122966 proteins in 4824 species: Archae - 125; Bacteria - 13959; Metazoa - 61902; Fungi - 9553; Plants - 33418; Viruses - 443; Other Eukaryotes - 17845 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7434235..7436830
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101977.2 → NP_173547.1  wall associated kinase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173547.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LMN8
      UniProtKB/TrEMBL
      A0A5S9VDN5
      Conserved Domains (3) summary
      cd14066
      Location:421 → 688
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam07645
      Location:293 → 328
      EGF_CA; Calcium-binding EGF domain
      pfam13947
      Location:31 → 129
      GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding

    2. NM_001332490.1 → NP_001321424.1  wall associated kinase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQU3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LMN8.2

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