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    Senescence/dehydration-associated protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821714, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Senescence/dehydration-associated protein-like protein
    Primary source
    TAIR:AT3G21600
    Locus tag
    AT3G21600
    See related
    Araport:AT3G21600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (7606460..7608477, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene cobalt ion transmembrane transporter Neighboring gene Senescence/dehydration-associated protein-like protein Neighboring gene Acid phosphatase/vanadium-dependent haloperoxidase-related protein Neighboring gene ERD (early-responsive to dehydration stress) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001338544.1
    NM_001338545.1
    NM_113055.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Senescence/dehydration-associated protein-like protein
    NP_001319611.1
    • Senescence/dehydration-associated protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT4G15450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_188797.1
    • Senescence/dehydration-associated protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT4G15450.1); Has 135 Blast hits to 135 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7606460..7608477 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113055.5 → NP_188797.1  Senescence/dehydration-associated protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188797.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XEC3, A0A654FHM4, Q9LVE6
      Conserved Domains (1) summary
      pfam06911
      Location:178 → 356
      Senescence; Senescence-associated protein

    2. NM_001338545.1 → NP_001327470.1  Senescence/dehydration-associated protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VBU0, A0A1I9LSF2
      Conserved Domains (1) summary
      pfam06911
      Location:178 → 212
      Senescence; Senescence-associated protein

    3. NM_001338544.1 → NP_001319611.1  Senescence/dehydration-associated protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FHM4, F4IXM9
    Nucleotide Protein
    Heading Accession and Version

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