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    FdC2 2Fe-2S ferredoxin-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840149, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FdC2
    Official Full Name
    2Fe-2S ferredoxin-like superfamily protein
    Primary source
    TAIR:AT1G32550
    Locus tag
    AT1G32550
    See related
    Araport:AT1G32550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ferredoxin C 2; T9G5.4; T9G5_4
    Summary
    Encodes FdC2, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.
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    Genomic context

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    See FdC2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (11771621..11774294, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene lsd one like 1 Neighboring gene Late embryogenesis abundant protein, group 1 protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ferredoxin C2 is required for chlorophyll biosynthesis and accumulation of photosynthetic antennae in Arabidopsis. Tournaire MD, et al. Plant Cell Environ, 2023 Nov. PMID 37427830, Free PMC Article
    2. FdC1, a novel ferredoxin protein capable of alternative electron partitioning, increases in conditions of acceptor limitation at photosystem I. Voss I, et al. J Biol Chem, 2011 Jan 7. PMID 20966083, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Ferredoxin C2 is required for chlorophyll biosynthesis and accumulation of photosynthetic antennae in Arabidopsis.
      Title: Ferredoxin C2 is required for chlorophyll biosynthesis and accumulation of photosynthetic antennae in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001160917.1
    NM_102990.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables electron transfer activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in electron transport chain IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    2Fe-2S ferredoxin-like superfamily protein
    NP_001154389.1
    • 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 2669 Blast hits to 2667 proteins in 530 species: Archae - 94; Bacteria - 1212; Metazoa - 6; Fungi - 1; Plants - 619; Viruses - 5; Other Eukaryotes - 732 (source: NCBI BLink).
    NP_174533.1
    • 2Fe-2S ferredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 3 (TAIR:AT2G27510.1); Has 4986 Blast hits to 4984 proteins in 1076 species: Archae - 133; Bacteria - 3265; Metazoa - 6; Fungi - 1; Plants - 617; Viruses - 5; Other Eukaryotes - 959 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      11771621..11774294 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102990.5 → NP_174533.1  2Fe-2S ferredoxin-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174533.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C7Y4
      UniProtKB/TrEMBL
      A0A178WJI4, A0A5S9WN10
      Conserved Domains (1) summary
      cl00159
      Location:58 → 154
      fer2; 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis ...

    2. NM_001160917.1 → NP_001154389.1  2Fe-2S ferredoxin-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154389.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IE99
      Conserved Domains (1) summary
      cl00159
      Location:58 → 167
      fer2; 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C7Y4.1

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