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    Regulator of chromosome condensation (RCC1) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838576, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Regulator of chromosome condensation (RCC1) family protein
    Primary source
    TAIR:AT1G19880
    Locus tag
    AT1G19880
    See related
    Araport:AT1G19880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6F9.7; F6F9_7
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    16
    Sequence:
    Chromosome: 1; NC_003070.9 (6900337..6904155, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein Neighboring gene IQ-domain 32 Neighboring gene male-gamete-specific histone H3 Neighboring gene glyoxal oxidase-related protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plasticity of rosette size in response to nitrogen availability is controlled by an RCC1-family protein. Duarte GT, et al. Plant Cell Environ, 2021 Oct. PMID 34228823
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Plasticity of rosette size in response to nitrogen availability is controlled by an RCC1-family protein.
      Title: Plasticity of rosette size in response to nitrogen availability is controlled by an RCC1-family protein.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_101843.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Regulator of chromosome condensation (RCC1) family protein
    NP_173417.2
    • Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 17859 Blast hits to 6314 proteins in 497 species: Archae - 78; Bacteria - 2347; Metazoa - 6181; Fungi - 1100; Plants - 2708; Viruses - 16; Other Eukaryotes - 5429 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6900337..6904155 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101843.4 → NP_173417.2  Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173417.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WQC8, F4HQZ1, Q8L7B6
      Conserved Domains (1) summary
      COG5184
      Location:38 → 384
      ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    Nucleotide Protein
    Heading Accession and Version

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