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    rRNA-processing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828047, updated on 18-Sep-2024

    Summary

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    Official Full Name
    rRNA-processing protein
    Primary source
    TAIR:AT4G03180
    Locus tag
    AT4G03180
    See related
    Araport:AT4G03180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4C21.10; F4C21_10
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (1403117..1404937)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene AP2/B3-like transcriptional factor family protein Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GRR1-like protein 1 Neighboring gene catalytics

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001340433.1
    NM_116554.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    rRNA-processing protein
    NP_192227.1
    • CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1403117..1404937
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116554.3 → NP_192227.1  rRNA-processing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192227.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V3M5, Q9ZR13

    2. NM_001340433.1 → NP_001327982.1  rRNA-processing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B3A5, A0A7G2F0G2
    Nucleotide Protein
    Heading Accession and Version

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