Phospholipase A2 family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Phospholipase A2 family protein
Primary source: TAIR:AT4G29070
Locus tag: AT4G29070
See related: Araport:AT4G29070
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F19B15.100; F19B15_100
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 3

Sequence:: Chromosome: 4; NC_003075.7 (14321807..14323336)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

Orthologs from OrthoDB

NM_001036667.3

Supported by ESTs:

NM_119051.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables phospholipase A2 activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in arachidonate secretion	IEA Inferred from Electronic Annotation more info
involved_in phospholipid metabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: Phospholipase A2 family protein

NP_001031744.1

Phospholipase A2 family protein; CONTAINS InterPro DOMAIN/s: Phospholipase A2 (InterPro:IPR016090); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NP_567821.1

Phospholipase A2 family protein; CONTAINS InterPro DOMAIN/s: Phospholipase A2 (InterPro:IPR016090); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

14321807..14323336

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_119051.3 → NP_567821.1 Phospholipase A2 family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_567821.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178UVI9, A0A654FTT4, Q2HIU1, Q681J9, Q8LCU8

Conserved Domains (1) summary

cd04706
Location:114 → 253

PLA2_plant; Plant-specific sub-family of Phospholipase A2, a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. Enzymatically active PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids; ...
NM_001036667.3 → NP_001031744.1 Phospholipase A2 family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001031744.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178UVI9, A0A654FTT4, Q2HIU1, Q681J9, Q8LCU8

Conserved Domains (1) summary

cd04706
Location:114 → 253

PLA2_plant; Plant-specific sub-family of Phospholipase A2, a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. Enzymatically active PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids; ...