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    PAP20 Purple acid phosphatases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824444, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PAP20
    Official Full Name
    Purple acid phosphatases superfamily protein
    Primary source
    TAIR:AT3G52780
    Locus tag
    AT3G52780
    See related
    Araport:AT3G52780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATPAP20
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    Genomic context

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    See PAP20 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (19561260..19564350, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene binding protein Neighboring gene ncRNA Neighboring gene peptidoglycan-binding LysM domain-containing protein Neighboring gene A20/AN1-like zinc finger family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression patterns of purple acid phosphatase genes in Arabidopsis organs and functional analysis of AtPAP23 predominantly transcribed in flower. Zhu H, et al. Plant Mol Biol, 2005 Nov. PMID 16244908
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_115138.3
    NM_180355.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables acid phosphatase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within dephosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Purple acid phosphatases superfamily protein
    NP_190846.1
    • PAP20; FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2203 Blast hits to 2179 proteins in 456 species: Archae - 3; Bacteria - 801; Metazoa - 198; Fungi - 77; Plants - 777; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink).
    NP_850686.1
    • PAP20; FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2133 Blast hits to 2115 proteins in 453 species: Archae - 1; Bacteria - 782; Metazoa - 195; Fungi - 75; Plants - 759; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19561260..19564350 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115138.3 → NP_190846.1  Purple acid phosphatases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190846.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3EAK8, Q9LXI7
      UniProtKB/TrEMBL
      A0A178VAF9, A0A7G2EQQ9
      Conserved Domains (1) summary
      PLN02533
      Location:1 → 427
      PLN02533; probable purple acid phosphatase

    2. NM_180355.1 → NP_850686.1  Purple acid phosphatases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850686.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LXI7
      Conserved Domains (3) summary
      cd00839
      Location:139 → 337
      MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
      pfam00149
      Location:140 → 334
      Metallophos; Calcineurin-like phosphoesterase
      pfam16656
      Location:44 → 133
      Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LXI7.1

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