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    glyoxal oxidase-related protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824562, updated on 18-Sep-2024

    Summary

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    Official Full Name
    glyoxal oxidase-related protein
    Primary source
    TAIR:AT3G53950
    Locus tag
    AT3G53950
    See related
    Araport:AT3G53950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (19975339..19977532)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene Mitochondrial substrate carrier family protein Neighboring gene Major facilitator superfamily protein Neighboring gene tRNA-Gly

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression Patterns and Functional Characterization of Arabidopsis Galactose Oxidase-Like Genes Suggest Specialized Roles for Galactose Oxidases in Plants. Šola K, et al. Plant Cell Physiol, 2021 Dec 27. PMID 34042158
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_115255.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glyoxal oxidase-related protein
    NP_190963.1
    • glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G75620.1); Has 849 Blast hits to 839 proteins in 169 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 246; Plants - 262; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19975339..19977532
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115255.4 → NP_190963.1  glyoxal oxidase-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190963.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VIG5, A0A654FGH2, Q9M332
      Conserved Domains (2) summary
      cd02851
      Location:438 → 543
      E_set_GO_C; C-terminal Early set domain associated with the catalytic domain of galactose oxidase
      pfam07250
      Location:48 → 289
      Glyoxal_oxid_N; Glyoxal oxidase N-terminus
    Nucleotide Protein
    Heading Accession and Version

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