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    Preprotein translocase Sec, Sec61-beta subunit protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825225, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Preprotein translocase Sec, Sec61-beta subunit protein
    Primary source
    TAIR:AT3G60540
    Locus tag
    AT3G60540
    See related
    Araport:AT3G60540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (22374864..22375916, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene GATA transcription factor 4 Neighboring gene ncRNA Neighboring gene cyclin p3;2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001340049.1
    NM_115918.3
    NM_202738.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Preprotein translocase Sec, Sec61-beta subunit protein
    NP_191613.1
    • Preprotein translocase Sec, Sec61-beta subunit protein; CONTAINS InterPro DOMAIN/s: Preprotein translocase Sec, Sec61-beta subunit, eukarya (InterPro:IPR016482), Preprotein translocase Sec, Sec61-beta subunit (InterPro:IPR005609); BEST Arabidopsis thaliana protein match is: Preprotein translocase Sec, Sec61-beta subunit protein (TAIR:AT2G45070.4); Has 393 Blast hits to 393 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 114; Plants - 109; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
    NP_974467.1
    • Preprotein translocase Sec, Sec61-beta subunit protein; CONTAINS InterPro DOMAIN/s: Preprotein translocase Sec, Sec61-beta subunit, eukarya (InterPro:IPR016482), Preprotein translocase Sec, Sec61-beta subunit (InterPro:IPR005609); BEST Arabidopsis thaliana protein match is: Preprotein translocase Sec, Sec61-beta subunit protein (TAIR:AT2G45070.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22374864..22375916 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115918.3 → NP_191613.1  Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191613.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8GY93, Q9M206
      Conserved Domains (1) summary
      pfam03911
      Location:36 → 72
      Sec61_beta; Sec61beta family

    2. NM_001340049.1 → NP_001327136.1  Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8GY93, Q9M206

    3. NM_202738.2 → NP_974467.1  Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974467.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8GY93, Q9M206
      Conserved Domains (1) summary
      pfam03911
      Location:36 → 72
      Sec61_beta; Sec61beta family
    Nucleotide Protein
    Heading Accession and Version

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