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    PFK4 phosphofructokinase 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836279, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PFK4
    Official Full Name
    phosphofructokinase 4
    Primary source
    TAIR:AT5G61580
    Locus tag
    AT5G61580
    See related
    Araport:AT5G61580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K11J9.3; K11J9_3; phosphofructokinase 4
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    Genomic context

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    See PFK4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Sequence:
    Chromosome: 5; NC_003076.8 (24761041..24764168)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene U-box domain-containing protein kinase family protein Neighboring gene Protein kinase superfamily protein Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene ethylene response factor 104

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterisation of the ATP-dependent phosphofructokinase gene family from Arabidopsis thaliana. Mustroph A, et al. FEBS Lett, 2007 May 29. PMID 17485088
    2. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001037043.1
    NM_125551.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 6-phosphofructokinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fructose 6-phosphate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within glycolytic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    phosphofructokinase 4
    NP_001032120.1
    • phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink).
    NP_200966.2
    • phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24761041..24764168
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125551.4 → NP_200966.2  phosphofructokinase 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200966.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V2W5, Q9FKG3
      UniProtKB/TrEMBL
      A0A178UCI3, A0A7G2FKZ3
      Conserved Domains (1) summary
      PLN02564
      Location:66 → 530
      PLN02564; 6-phosphofructokinase

    2. NM_001037043.1 → NP_001032120.1  phosphofructokinase 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001032120.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2FIT2
      Conserved Domains (1) summary
      PLN02564
      Location:66 → 529
      PLN02564; 6-phosphofructokinase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FKG3.1

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