U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    G2484-1 G2484-1 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827445, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    G2484-1
    Official Full Name
    G2484-1 protein
    Primary source
    TAIR:AT4G17330
    Locus tag
    AT4G17330
    See related
    Araport:AT4G17330
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATG2484-1; DL4700C; FCAALL.411; G2484-1 protein
    Summary
    gene of unknown function expressed in seedlings, flower buds and stems
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See G2484-1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    17
    Sequence:
    Chromosome: 4; NC_003075.7 (9688851..9697706, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Class II aminoacyl-tRNA and biotin synthetases superfamily protein Neighboring gene uncharacterized protein Neighboring gene tonoplast intrinsic protein 2;2 Neighboring gene auxin canalization protein (DUF828) Neighboring gene Formyl transferase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. SWO1 modulates cell wall integrity under salt stress by interacting with importin ɑ in Arabidopsis. Wang Z, et al. Stress Biol, 2021 Sep 29. PMID 37676567, Free PMC Article
    2. Post-transcriptional control of GRF transcription factors by microRNA miR396 and GIF co-activator affects leaf size and longevity. Debernardi JM, et al. Plant J, 2014 Aug. PMID 24888433
    3. bHLH05 is an interaction partner of MYB51 and a novel regulator of glucosinolate biosynthesis in Arabidopsis. Frerigmann H, et al. Plant Physiol, 2014 Sep. PMID 25049362, Free PMC Article
    4. Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Elrouby N, et al. Proc Natl Acad Sci U S A, 2010 Oct 5. PMID 20855607, Free PMC Article
    5. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help
    NM_001341214.1
    NM_001341215.1
    NM_117837.7

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    G2484-1 protein
    NP_193464.5
    • G2484-1 protein (G2484-1); FUNCTIONS IN: RNA binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2); Has 6169 Blast hits to 4010 proteins in 631 species: Archae - 30; Bacteria - 1624; Metazoa - 1931; Fungi - 976; Plants - 400; Viruses - 26; Other Eukaryotes - 1182 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9688851..9697706 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117837.7 → NP_193464.5  G2484-1 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193464.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FQC1, F4JP43
      Conserved Domains (2) summary
      smart00743
      Location:1662 → 1720
      Agenet; Tudor-like domain present in plant sequences
      pfam05641
      Location:1576 → 1640
      Agenet; Agenet domain

    2. NM_001341214.1 → NP_001329269.1  G2484-1 protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FQC1, F4JP43

    3. NM_001341215.1 → NP_001329268.1  G2484-1 protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B770, A0A654FQC1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.