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    PRKR-interacting protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816016, updated on 18-Sep-2024

    Summary

    Official Full Name
    PRKR-interacting protein
    Primary source
    TAIR:AT2G15270
    Locus tag
    AT2G15270
    See related
    Araport:AT2G15270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F27O10.8; F27O10_8
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    Genomic context

    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (6637831..6639429)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene RING/U-box superfamily protein Neighboring gene miscRNA Neighboring gene Reticulon family protein Neighboring gene translocon at inner membrane of chloroplasts 21

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001335448.1
    NM_127087.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    PRKR-interacting protein
    NP_565371.1
    • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1168 (InterPro:IPR009548); Has 1930 Blast hits to 1364 proteins in 219 species: Archae - 0; Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96; Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      6637831..6639429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127087.2NP_565371.1  PRKR-interacting protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565371.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VPR2, A0A384LII7, A0A7G2ECG8, Q94AT9, Q9SHU9
      Conserved Domains (1) summary
      pfam06658
      Location:79127
      DUF1168; Protein of unknown function (DUF1168)
    2. NM_001335448.1NP_001323551.1  PRKR-interacting protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VPR2, A0A384LII7, A0A7G2ECG8, Q94AT9, Q9SHU9
      Conserved Domains (1) summary
      pfam06658
      Location:79127
      DUF1168; Protein of unknown function (DUF1168)