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    mucin [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843644, updated on 18-Sep-2024

    Summary

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    Official Full Name
    mucin
    Primary source
    TAIR:AT1G73130
    Locus tag
    AT1G73130
    See related
    Araport:AT1G73130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T18K17.21; T18K17_21
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (27498929..27502273)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene F-box/RNI superfamily protein Neighboring gene trichome birefringence-like protein (DUF828) Neighboring gene global transcription factor group E3 Neighboring gene UDP-Glycosyltransferase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dicot-specific ATG8-interacting ATI3 proteins interact with conserved UBAC2 proteins and play critical roles in plant stress responses. Zhou J, et al. Autophagy, 2018. PMID 29313416, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334567.1
    NM_001334568.1
    NM_105971.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within heat acclimation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    mucin
    NP_177456.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17780.2); Has 1447 Blast hits to 774 proteins in 215 species: Archae - 0; Bacteria - 679; Metazoa - 377; Fungi - 171; Plants - 42; Viruses - 6; Other Eukaryotes - 172 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27498929..27502273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334565.1 → NP_001321347.1  mucin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9B2, A0A1P8AQL4

    2. NM_001334566.1 → NP_001321349.1  mucin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9B2, A0A5S9WTX7, Q9S781

    3. NM_105971.4 → NP_177456.1  mucin [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177456.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9B2, A0A5S9WTX7, Q9S781

    4. NM_001334567.1 → NP_001321348.1  mucin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9B2, A0A5S9WTX7, Q9S781

    5. NM_001334568.1 → NP_001321350.1  mucin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9B2, A0A1P8AQL4
    Nucleotide Protein
    Heading Accession and Version

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