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    elongation factor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841041, updated on 18-Sep-2024

    Summary

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    Official Full Name
    elongation factor
    Primary source
    TAIR:AT1G44770
    Locus tag
    AT1G44770
    See related
    Araport:AT1G44770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T12C22.4; T12C22_4
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (16907537..16909572, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene purine permease 11 Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene translation initiation factor Neighboring gene ChaC-like family protein Neighboring gene nodulin MtN21 /EamA-like transporter family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001123965.1
    NM_103558.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    elongation factor
    NP_001117437.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_175098.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      16907537..16909572 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103558.4 → NP_175098.1  elongation factor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175098.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WMH5, A0A654EG01, Q84WK2

    2. NM_001123965.1 → NP_001117437.1  elongation factor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117437.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DZ98, B3H607
    Nucleotide Protein
    Heading Accession and Version

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