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    signal recognition particle 19 kDa protein, putative / SRP19 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841235, updated on 18-Sep-2024

    Summary

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    Official Full Name
    signal recognition particle 19 kDa protein, putative / SRP19
    Primary source
    TAIR:AT1G48160
    Locus tag
    AT1G48160
    See related
    Araport:AT1G48160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F21D18.11; F21D18_11
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (17786498..17789024, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene plant mobile domain protein Neighboring gene MADS-box transcription factor family protein Neighboring gene proteasome assembly chaperone Neighboring gene Cytidine/deoxycytidylate deaminase family protein Neighboring gene target of trans acting-siR480/255 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    NM_001333300.1
    NM_103712.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 7S RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in SRP-dependent cotranslational protein targeting to membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    signal recognition particle 19 kDa protein, putative / SRP19
    NP_175250.1
    • signal recognition particle 19 kDa protein, putative / SRP19, putative; FUNCTIONS IN: 7S RNA binding; INVOLVED IN: protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP19 subunit (InterPro:IPR002778); Has 500 Blast hits to 499 proteins in 236 species: Archae - 81; Bacteria - 0; Metazoa - 158; Fungi - 144; Plants - 60; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17786498..17789024 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103712.3 → NP_175250.1  signal recognition particle 19 kDa protein, putative / SRP19 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175250.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q943Z6, Q9LNG9
      UniProtKB/TrEMBL
      A0A178WG48, A0A5S9WMV6
      Conserved Domains (1) summary
      pfam01922
      Location:13 → 107
      SRP19; SRP19 protein

    2. NM_001333300.1 → NP_001323146.1  signal recognition particle 19 kDa protein, putative / SRP19 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q943Z6, Q9LNG9
      UniProtKB/TrEMBL
      A0A178WG48, A0A5S9WMV6
      Conserved Domains (1) summary
      pfam01922
      Location:13 → 107
      SRP19; SRP19 protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q943Z6.1

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